BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027C12LP1|AL428704
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1094 1724 0.0
>3x_Contig1094
Length = 4859
Score = 1724 bits (869), Expect = 0.0
Identities = 870/871 (99%)
Strand = Plus / Minus
Query: 1 taatatcatcaagagaatatacacgaaaaacagttcgtcatttgttcataattgtcatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3776 taatatcatcaagagaatatacacgaaaaacagttcgtcatttgttcataattgtcatgc 3717
Query: 61 tgtcctgaaagwactcaaagattggtttgatggattaccctcagaactaaagttcgacta 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3716 tgtcctgaaagaactcaaagattggtttgatggattaccctcagaactaaagttcgacta 3657
Query: 121 caataacttcagtcttgaaacttccagaccaaccgtgaatttacacatcaactacaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3656 caataacttcagtcttgaaacttccagaccaaccgtgaatttacacatcaactacaatta 3597
Query: 181 cttaatcatactcaccaccagatctgttgtgttttatgtcttcaacaaactagtgtctag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3596 cttaatcatactcaccaccagatctgttgtgttttatgtcttcaacaaactagtgtctag 3537
Query: 241 tgggaaaacaacagacgaactgtttgccaagaacttgagggagatcataattgtactttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3536 tgggaaaacaacagacgaactgtttgccaagaacttgagggagatcataattgtactttt 3477
Query: 301 cgaagccagcatcaatgctgcccagattcagagcgtgatattgactagactatactatgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3476 cgaagccagcatcaatgctgcccagattcagagcgtgatattgactagactatactatgc 3417
Query: 361 tggtagaatgatgaatcgatcttttttggactgccactacatattcaactcaagtgtagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3416 tggtagaatgatgaatcgatcttttttggactgccactacatattcaactcaagtgtagt 3357
Query: 421 cctcatattagcagccttcatacagtcgcttcccaattacctgcttaatgaaagcagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3356 cctcatattagcagccttcatacagtcgcttcccaattacctgcttaatgaaagcagtga 3297
Query: 481 tgttaatattttgttcagccgggttcaagataatcttgacgttttacaacgtatttctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3296 tgttaatattttgttcagccgggttcaagataatcttgacgttttacaacgtatttctca 3237
Query: 541 gtacaatgtggcaggattcaatttcaataagcaactaactgaactaatagaacttattag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3236 gtacaatgtggcaggattcaatttcaataagcaactaactgaactaatagaacttattag 3177
Query: 601 ctgcgaacaagttcagaaaatgtacaacggtaatatgcaaagacattctctcaacgcgac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3176 ctgcgaacaagttcagaaaatgtacaacggtaatatgcaaagacattctctcaacgcgac 3117
Query: 661 tagcgcaatagaaacttttacaattgctttaaagtcaccatctgttgaggaaaagaacaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3116 tagcgcaatagaaacttttacaattgctttaaagtcaccatctgttgaggaaaagaacaa 3057
Query: 721 ttcatatgagggccaggagctattaagccatatggatttatcagaagttctagaattgat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3056 ttcatatgagggccaggagctattaagccatatggatttatcagaagttctagaattgat 2997
Query: 781 gacatcaagcaacggctatccaaactctggaacttctcactttgatgaggatgatttcct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2996 gacatcaagcaacggctatccaaactctggaacttctcactttgatgaggatgatttcct 2937
Query: 841 caagttttcaaacttcatgctgtgaatactt 871
|||||||||||||||||||||||||||||||
Sbjct: 2936 caagttttcaaacttcatgctgtgaatactt 2906
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6684
Number of Sequences: 1807
Number of extensions: 6684
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)